STMiner

Contents:

  • Introduction
  • Installation
  • Tutorial
  • API Reference
  • Benchmark for SVG detections
STMiner
  • Index

Index

B | C | F | G | M | P | R | S

B

  • build_distance_array() (STMiner.SPFinder method)

C

  • compare_gene_to_genes() (STMiner.SPFinder method)
  • compare_image_to_genes() (STMiner.SPFinder method)

F

  • fit_pattern() (STMiner.SPFinder method)

G

  • get_custom_pattern() (STMiner.SPFinder method)
  • get_genes_csr_array() (STMiner.SPFinder method)

M

  • merge_bin() (STMiner.SPFinder method)

P

  • Plot (class in STMiner.Plot)
  • plot_gene() (STMiner.Plot.Plot method)
  • plot_gmm() (STMiner.SPFinder method)
  • plot_intersection() (STMiner.Plot.Plot method)
  • plot_pattern() (STMiner.Plot.Plot method)

R

  • read_h5ad() (STMiner.SPFinder method)

S

  • set_adata() (STMiner.SPFinder method)
  • spatial_high_variable_genes() (STMiner.SPFinder method)
  • SPFinder (class in STMiner)

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